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This page navigates the repository’s governance and technical corpus, which lives on this site as the articles listed below (converted from the former docs/ tree; a handful of cross-references in older records still cite the historical paths). It links, never copies: the roster is re-derived from the repository bytes by the governing test, so an article added or renamed without a bridge row reddens the suite.

For the user-facing learning path (install, first analysis, and the task guides), start at Get started and the tour.

Architecture decision records (ADRs)

Article What it is
ADR 0001: the 2bit reader selection — adopting the twobit crate (over Cursor<Mmap>) adr-0001-twobit-reader-choice
ADR 0002: the vendor size budget and the MSRV build proof (the U-M0-02 spike) adr-0002-vendor-budget

Paper lane

Article What it is
msuiter — manuscript spine (PP-1 draft) paper-draft
Reproduction proof — msuiter paper lane (PP-1) reproduction-proof

Release engineering

Article What it is
v0.1 release-engineering preparation checklist (the non-blocking preparation batch) release-v0.1-checklist

Campaign devlog (the dated decision & delivery records)

Article What it is
Devlog · G0 先导覆盖实验——PI 裁决与待冻结项(2026-09-28) devlog-2026-09-28-G0-pi-adjudication
G0 先导覆盖实验协议设计备忘(冻结前草案 v0.1,2026-09-28) devlog-2026-09-28-G0-protocol-memo
G0 先导覆盖实验——生物学与数据现实性备忘 devlog-2026-09-28-G0-realism-memo
Devlog · G3 事件驱动竞争复核:Cornet 预印本正式发表(2026-09-28) devlog-2026-09-28-G3-cornet-event-review
Devlog · U-M0-01 rextendr 脚手架 + Cargo workspace(2026-09-28) devlog-2026-09-28-M0-01
Devlog · U-M0-02 M0 spike(2026-09-28) devlog-2026-09-28-M0-02
Devlog · U-M0-03 S7 类骨架(2026-09-28,W2 轮) devlog-2026-09-28-M0-03
Devlog · U-M0-04 引擎注册表 + 契约测试套件(2026-09-28,W3 轮) devlog-2026-09-28-M0-04
Devlog · U-M0-05 通道注册表单一事实来源 + docs-sync(2026-09-28,W2 轮) devlog-2026-09-28-M0-05
Devlog · U-M0-06 自研 RNG 模块(2026-09-28,W2 轮) devlog-2026-09-28-M0-06
Devlog · U-M0-09 FFI 硬契约落地 + ms_sitrep()(2026-09-28,W3 轮) devlog-2026-09-28-M0-09
Devlog · 假设审计备忘:Cornet 之后的领域共同假设地图(2026-09-28) devlog-2026-09-28-assumption-audit-memo
Devlog · G0 harness 开建与修复(2026-09-29) devlog-2026-09-29-G0-harness
Devlog · U-M0-07 CI + U-M0-08 治理文件(2026-09-29,W4 轮,联合) devlog-2026-09-29-M0-07-08
Devlog · U-M1s-01 linalg + Lawson–Hanson NNLS(2026-09-29,W4 轮,M1s 轨道开闸) devlog-2026-09-29-M1s-01
Devlog · U-M1s-02 修复 + U-M1s-03 green pass + U-M1s-04(2026-09-29) devlog-2026-09-29-M1s-02-03-04
GMM 超突变分层语义设计备忘(U-M1c-02·先设计后实现) devlog-2026-09-30-GMM-stratify-memo
ID83 语义设计备忘(M1c 头号单元·先设计后实现) devlog-2026-09-30-ID83-design-memo
Devlog · U-M1c-02/03/04 GMM 分层器 + CN48/SV32(2026-09-30) devlog-2026-09-30-M1c-02-03-04
Devlog · U-M1c-02 GMM 超突变分层器(2026-09-30) devlog-2026-09-30-M1c-02-GMM-stratify
Devlog · M1c 输入层收尾(2026-09-30)——M1c 里程碑 4/4 关闭 devlog-2026-09-30-M1c-input-close
Devlog · U-M1s-05 线程不变性接线 + 审核轮(2026-09-30) devlog-2026-09-30-M1s-05
Devlog · U-M1s-09/10/11 组装层 + 审计修复(2026-09-30) devlog-2026-09-30-M1s-09-10-11
Devlog · U-M1s-12/14 收尾批次 + 审核轮(2026-09-30) devlog-2026-09-30-M1s-12-14
Devlog · U-M1s-12 审核 + U-M1s-13 正式化 + M1s 验收门 bench(2026-09-30) devlog-2026-09-30-M1s-13-bench
Devlog · 并行 tally 优化 + sigminer/MP 交叉验证(2026-09-30) devlog-2026-09-30-M1s-xval-parallel
设计备忘 · M2 统一提取流水线(共识 Hungarian 语义 + SUITOR CV 语义 + K 仲裁规则) devlog-2026-09-30-M2-pipeline-design-memo
Devlog · M1c/M2/M3a 联合批次(2026-10-01 夜间) devlog-2026-10-01-M1c-M2-M3a-night
Devlog · U-M3a-04/05/06 收官批(2026-10-02 凌晨) devlog-2026-10-02-M3a-04-05-06
Devlog · U-M3a-03 presence P0 + bootstrap CI P1 修复记录(2026-10-03) devlog-2026-10-03-presence-bootstrap-fix
Devlog · M3b 收官三件:U-M3b-04 / 05 / 06(2026-10-04) devlog-2026-10-04-M3b-close
Devlog · M3b 设计备忘 + M3a 关闭确认轮(2026-10-04) devlog-2026-10-04-M3b-design-close
设计备忘 · M3b MSU-Fit 校准统计(2026-10-04) devlog-2026-10-04-M3b-design-memo
U-M4-01 设计备忘:ms_compare() 校准相似度库 devlog-2026-10-04-M4-01-design-memo
U-M4-02 设计备忘:ms_downsample() + 格式互操作首批 devlog-2026-10-04-M4-02-design-memo
U-M4-02b 设计备忘:ms_qc_report() 初版(样本 QC 报告) devlog-2026-10-04-M4-02b-qc-memo
U-M4-02c 设计备忘:ms_convert() 机会转换(exome↔︎genome) devlog-2026-10-04-M4-02c-convert-memo
U-M4-03 设计备忘:viz 首批 8 图型 devlog-2026-10-04-M4-03-viz-memo
bench/jiang 设计备忘:Jiang 2025 拟合协议对标(v0.2 验收门证据) devlog-2026-10-05-bench-jiang-memo
M7 前置设计备忘:ms_benchmark() 网格驱动器 devlog-2026-10-05-benchmark-design-memo
U-M7 前置设计备忘:ms_simulate() 第一版(场景目录模拟器) devlog-2026-10-05-simulate-memo
CI contract closure (round-7, 2026-10-07) devlog-2026-10-07-ci-contract-closure
G0 authoritative run — measured cost basis for the PI go/no-go (2026-10-07) devlog-2026-10-07-g0-pi-run-cost-memo
M6s · ms_hrd_report() — ground-truth anchoring & design (U-M6s-01, A12) devlog-2026-10-07-m6s-hrd-report-design
U-M6s-01 RED batch adjudications (T1 → T2 GREEN handoff) devlog-2026-10-07-m6s-red-adjudication
G0 degraded authoritative run — PI-gate closure (2026-10-08) devlog-2026-10-08-g0-degraded-closure
U-M7-02 competitor benchmark harness — design memo (2026-10-08) devlog-2026-10-08-m7-competitor-harness-design
U-M7-03 benchmark matrix — Phase-A pilot, projection, and the sigminer interpreter catch (2026-10-09) devlog-2026-10-09-m7-benchmark-matrix
M7 benchmark ergonomics — the three-function trio stays three devlog-2026-10-10-m7-benchmark-ergonomics
GO-05 bootstrap-vs-sigminer campaign — pre-registered protocol (2026-10-10) devlog-2026-10-10-m7-bootstrap-campaign
GO-05 hardware-pin completeness — the authoritative table must attest its machine (2026-10-10) devlog-2026-10-10-m7-hardware-pin
RB-11 restoration — instrument liveness attestation and evidence-snapshot laws (2026-10-10) devlog-2026-10-10-m7-rb11-restoration
GO-05 anchor-gate amendment — the median clause moves to the CI-noise envelope devlog-2026-10-11-go05-anchor-gate-amendment
GO-05 tier-oracle amendment — consumed vs report-only fits, the floor-gate devlog-2026-10-11-go05-tier-oracle-amendment
2026-10-21 – CI wall-clock restructure: shard-parallel attested arms devlog-2026-10-21-ci-shard-parallel
Valgrind leg, child instrumentation: the execve escape, the last-writer devlog-2026-10-21-valgrind-trace-children-census
M4-03b — viz batch 2 design memo devlog-2026-10-24-M4-03b-viz-batch2-memo
P8-CS-3 — treatment-forensics reporting face design memo devlog-2026-10-28-p8-treatment-forensics-design
Build-pin drift attestation – blob-form re-anchor of the arm-recipe digest pins (2026-11-04) devlog-2026-11-04-m7-build-pin-drift-attestation
2026-11-05 – CI PR-gate tiering ruling: three arms, one tier, nightly depth devlog-2026-11-05-ci-pr-gate-tiering-ruling
2026-11-05 – P7cap batch-face no-stamp ruling: archival record (audit #74 P2) devlog-2026-11-05-p7cap-no-stamp-ruling-archive
2026-11-07 – Generator-emitted artifacts: the dead docs/ citation sweep devlog-2026-11-07-generator-doc-citation-sweep
2026-11-07 – Runner-image pin ruling: the valgrind leg adjudicates a pinned environment devlog-2026-11-07-runner-image-pin-ruling