Perform Scissor Cell Evaluation — DoScissorCellEval • SigBridgeR

Evaluates the significance of Scissor-identified cells using benchmark data and bootstrap resampling.

Usage

DoScissorCellEval(
  benchmark_data_path = "path_to_file.RData",
  scissor_res,
  FDR_cutoff = 0.05,
  bootstrap_n = 100L,
  verbose = getFuncOption("verbose"),
  ...
)

Arguments

benchmark_data_path: Path to benchmark data (RData file)
scissor_res: Scissor results from Scissor
FDR_cutoff: FDR threshold for significance (default: 0.05)
bootstrap_n: Number of bootstrap iterations (default: 100L)
verbose: Whether to show progress messages (default: TRUE)
...: No usage

Value

Cell evaluation results with significance assessments

See also

Other scissor: DoScissor(), DoScissorRelTest()