Computes Pearson correlation between each gene's expression and drug response,
then ranks genes by absolute correlation. This matches the original
feature_ranking_bulk function from step0B.
Usage
feature_ranking_bulk(
infunc_drugName,
infunc_cancerType = "PanCan",
exclude_cancer = "PanCan",
infunc_GOI
)
Arguments
- infunc_drugName
Character. Name of the drug.
- infunc_cancerType
Character. Cancer type for training. Default = "PanCan".
- exclude_cancer
Character. Cancer type to exclude. Default = "PanCan".
- infunc_GOI
Character vector. Genes of Interest to rank.
Value
Matrix of ranked features with columns: p.value, estimate.cor (sorted by abs(cor) descending)
