PCAWG Full Sample Identifiers
Examples
# \donttest{
load_data("pcawg_full")
#> donor_unique_id
#> <char>
#> 1: BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33
#> 2: BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33
#> 3: BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33
#> 4: BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80
#> 5: BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80
#> ---
#> 7251: UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f
#> 7252: UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f
#> 7253: UCEC-US::ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38
#> 7254: UCEC-US::ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38
#> 7255: UCEC-US::ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38
#> submitter_donor_id icgc_donor_id
#> <char> <char>
#> 1: 096b4f32-10c1-4737-a0dd-cae04c54ee33 DO804
#> 2: 096b4f32-10c1-4737-a0dd-cae04c54ee33 DO804
#> 3: 096b4f32-10c1-4737-a0dd-cae04c54ee33 DO804
#> 4: 178b28cd-99c3-48dc-8d09-1ef71b4cee80 DO555
#> 5: 178b28cd-99c3-48dc-8d09-1ef71b4cee80 DO555
#> ---
#> 7251: fba80122-d8b2-4d8d-a032-9767e8160f9f DO42544
#> 7252: fba80122-d8b2-4d8d-a032-9767e8160f9f DO42544
#> 7253: ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38 DO42432
#> 7254: ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38 DO42432
#> 7255: ffaa98a0-2b69-46dc-aee5-c5c3f2abbc38 DO42432
#> aliquot_id submitter_specimen_id
#> <char> <char>
#> 1: e0fccaf5-925a-41f9-b87c-cd5ee4aecb59 27461a27-26eb-4c2c-9c54-e16fbd32c615
#> 2: 301d6ce3-4099-4c1d-8e50-c04b7ce91450 52f538ef-b05d-4c76-9976-ce6d49158016
#> 3: 22e154de-0e3b-443b-8420-48d68d6c1ce4 52f538ef-b05d-4c76-9976-ce6d49158016
#> 4: c1da8eed-4919-4ba5-a735-3fba476c18a7 cd3cfb26-e66f-408e-81f6-3b61c247c976
#> 5: 4838b5a9-968c-4178-bffb-3fafe1f6dc09 59d6683f-5eb7-493d-8e8e-78b88be2cd70
#> ---
#> 7251: e54b7e44-82a3-4016-bc32-129799097b4c ddd2f9e0-0aa3-425b-9d74-74fcc638cb08
#> 7252: ce5b0ba0-2777-4c92-ac50-483174cc5dca cad6c89d-f722-470b-93bc-e8b24c033f0f
#> 7253: 47f826a1-96ed-4f4d-94e0-49f4460ef44f 2729ed97-f971-4d98-8baa-f99404dd2b9f
#> 7254: 712ba532-fb1a-43fa-a356-b446b509ceb7 8bb3a057-8958-4f62-af81-976da2e92df7
#> 7255: ca81a393-ec7d-4538-a64a-417ed188a320 8bb3a057-8958-4f62-af81-976da2e92df7
#> icgc_specimen_id submitter_sample_id icgc_sample_id
#> <char> <char> <char>
#> 1: SP1682 e0fccaf5-925a-41f9-b87c-cd5ee4aecb59 SA5237
#> 2: SP1677 301d6ce3-4099-4c1d-8e50-c04b7ce91450 SA5195
#> 3: SP1677 22e154de-0e3b-443b-8420-48d68d6c1ce4 SA5213
#> 4: SP1135 c1da8eed-4919-4ba5-a735-3fba476c18a7 SA1598
#> 5: SP1132 4838b5a9-968c-4178-bffb-3fafe1f6dc09 SA1556
#> ---
#> 7251: SP92947 e54b7e44-82a3-4016-bc32-129799097b4c SA462448
#> 7252: SP92955 ce5b0ba0-2777-4c92-ac50-483174cc5dca SA462509
#> 7253: SP92731 47f826a1-96ed-4f4d-94e0-49f4460ef44f SA461078
#> 7254: SP92723 712ba532-fb1a-43fa-a356-b446b509ceb7 SA461016
#> 7255: SP92723 ca81a393-ec7d-4538-a64a-417ed188a320 SA461038
# }