ICGC Sample Identifiers
Examples
# \donttest{
load_data("icgc")
#> icgc_sample_id submitted_sample_id icgc_specimen_id
#> <char> <char> <char>
#> 1: SA170678 TCGA-02-0104-01A-01G-0295-06 SP29019
#> 2: SA170653 TCGA-02-0104-01A-01T-0301-07 SP29019
#> 3: SA170728 TCGA-02-0104-01A-01R-0299-03 SP29019
#> 4: SA170688 TCGA-02-0104-01A-01G-0296-02 SP29019
#> 5: SA170698 TCGA-02-0104-01A-01G-0326-02 SP29019
#> ---
#> 155870: SA539137 TCGA-94-8490-01A-11H-2325-13 SP115145
#> 155871: SA539135 TCGA-94-8490-01A-11D-2323-08 SP115145
#> 155872: SA539140 TCGA-94-8490-10A-01D-2322-01 SP115146
#> 155873: SA539141 TCGA-94-8490-10A-01D-2323-08 SP115146
#> 155874: SA539142 TCGA-94-8490-10A-01W-2345-08 SP115146
#> submitted_specimen_id icgc_donor_id submitted_donor_id
#> <char> <char> <char>
#> 1: TCGA-02-0104-01A DO13695 TCGA-02-0104
#> 2: TCGA-02-0104-01A DO13695 TCGA-02-0104
#> 3: TCGA-02-0104-01A DO13695 TCGA-02-0104
#> 4: TCGA-02-0104-01A DO13695 TCGA-02-0104
#> 5: TCGA-02-0104-01A DO13695 TCGA-02-0104
#> ---
#> 155870: TCGA-94-8490-01A DO52021 TCGA-94-8490
#> 155871: TCGA-94-8490-01A DO52021 TCGA-94-8490
#> 155872: TCGA-94-8490-10A DO52021 TCGA-94-8490
#> 155873: TCGA-94-8490-10A DO52021 TCGA-94-8490
#> 155874: TCGA-94-8490-10A DO52021 TCGA-94-8490
# }